Institute of Bioinformatics Münster
tryporfs
Overview
Description
Start Application
Download All uORFs (BED)
Download Longest uORFs (BED)
Contact
Selection
ID or Gene
Unique uORF identifier (Gene-Stop-Start)
Length
-
Minimum and maximum length
Chromosome
The chromosome (without the praefix "chr"!)
uORF Stop to CDS Start
-
Distance from uORF's stop codon to CDS's start codon
ASI
-
Amino acid similarity index of uORF sequence against uORF background
CAI
-
Codon adaptation index of uORF sequence against uORF background
CAI uORF against CDS CAI
-
Codon adaptation index of uORF sequence against CDS background
BSF uORF Weight
-
Ratio of uORF mRNA weight divided by CDS mRNA weight (BSF stage)
PCF uORF Weight
-
Ratio of uORF mRNA weight divided by CDS mRNA weight (PCF stage)
EMF uORF Weight
-
Ratio of uORF mRNA weight divided by CDS mRNA weight (EMF stage)
MCF uORF Weight
-
Ratio of uORF mRNA weight divided by CDS mRNA weight (MCF stage)
Options
Order by Column
-
id
chromosome
length
start
end
asi
cai
caiuorfagcds
bsfuorfweight
pcfuorfweight
emfuorfweight
mcfuorfweight
ascending
descending
Order result by this column
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