WWU Münster UKM
IoB
NEWS
2022-06
"paPAML: An Improved Computational Tool to Explore Selection Pressure on Protein-Coding Sequences" by Lynn Ogoniak, Norbert Grundmann and others
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2022-05-14
"Mobilome of Apicomplexa Parasites" by Rodriguez and Makalowski has been published by Genes.
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2022-04-27
"Software evaluation for de novo detection of transposons" by Rodriguez and Makalowski has been published by Mobile DNA.
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2022-04-01
"From telomere to telomere: The transcriptional and epigenetic state of human repeat elements” by T2T consortium has been published by Science.
Goto
2022-02-12
"Global research alliance in infectious disease: a collaborative effort to combat infectious diseases through dissemination of portable sequencing” by GRAID consortium that IoB is part of has been published by BMC Research Notes.
Goto
2021-08-05
Congratulations to Reza and Matias on the excellent contribution on TE-driven DNA transductions in the human genome
Goto
2021-05-29
"Somatic Functional Deletions of Upstream Open Reading Frame-Associated Initiation and Termination Codons in Human Cancer" was published by MDPI
Goto

Contact

Tabea
Name: Tabea Kischka (nèe Höhmann)
Status: Ph.D. student
Email: T.Kischka[at]uni-muenster.de
Room: 2650.110.206
Phone: +49 251 835300-3

Education

Research projects

  • upstream open reading frames (uORFs) and cancer

Publications

  • Shabardina, V, Kischka, T, Kmita, H, Suzuki, Y, Makalowski, W "Environmental adaptation of Acanthamoeba castellanii and Entamoeba histolytica at genome level as seen by comparative genomic analysis." (2018) International Journal of Biological Sciences
  • Schulz, J, Mah, N, Neuenschwander, M, Kischka, T, Ratei, R, Schlag, P M, ... Wethmar, K "Loss-of-function uORF mutations in human malignancies." (2018) Scientific Reports
  • Makalowski W, Kischka T, Makalowska I "Contribution of Transposable Elements to Human Proteins" (2017) eLS
  • Kuritzin A, Kischka T, Schmitz J, Churakov G "Incomplete Lineage Sorting and Hybridization Statistics for Large-Scale Retroposon Insertion Data." (2016) PLoS Computation Biol 12:e1004812
  • Jakalski M, Wakaguri H, Kischka TG, Nishikawa Y, Kawazu S, Matsubayashi M, Kawahara F, ... Yamagishi J "DB-AT: a 2015 update to the Full-parasites database brings a multitude of new transcriptomic data for apicomplexan parasites" (2015) Nucleic Acids Res. 2015 Jan;43(Database issue):D631-6

Attended Conferences and Workshops

Teaching

  • December 8-10, 2015: Bioinformatics practicals course teaching assistant
  • October 28-31, 2014: Bioinformatics practicals course teaching assistant
  • November 19-22, 2013: Bioinformatics practicals course teaching assistant
2018-05-22 14:29